Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVLRLFLKYGQN-------DERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW
1N33 Chain:H ((2-138))
--LTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1N33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61810 for 941 contacts (-65.7/contact) +
2D Compatibility (PS) -13620 + (NN) -899 + (LL) 260
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -93419.0 ( -99.28 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1N33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N33-query.scw
PDB file :
Tito_Scwrl_1N33.pdb
: