Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEV-TGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
1XKM Chain:A ((1-22))
-----------------------------------------------------------------ENREVPPGFTALIKTLRKCKII-------------------
General information:
TITO was launched using:
RESULT:
Template:
1XKM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3002 for 68 contacts (44.1/contact) +
2D Compatibility (PS) -2097 + (NN) -936 + (LL) 11564
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 9083.0 ( 133.57 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1XKM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XKM-query.scw
PDB file :
Tito_Scwrl_1XKM.pdb
: