Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIFKISFLILLVVIVSSYYGESFVLADNNPIVNSENGSDNNFESGTIERNQNELYEVGDYSTPLTERVFGKDQRTVVNNILQRPYKQTVLLNMTFSNNRVYKGTGTMIGKDIVLTAAHNVYSKDDKGWAKKIDVYAGVNGQTYTIGKAFSHKFFVSKTWINNLTIV
4NA8 Chain:A ((12-65))--------------------------------------------------------------------------------------WPWQVTLHTTSPTQRHLCG-GSIIGNQWILTAAHCFYGVES---PKILRVYSGILNQS------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11565 for 273 contacts (-42.4/contact) +
2D Compatibility (PS) -5900 + (NN) -3130 + (LL) 7164
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -18781.0 ( -68.79 by residue)
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_4NA8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NA8-query.scw
PDB file : Tito_Scwrl_4NA8.pdb: