Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKL-GNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK |
3N8B Chain:A ((6-50)) | ------------YSEKMFTESE-RTYFMNVKENRK---GDYFLNIVESKRSPSGDFERHSI------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1835 for 209 contacts (8.8/contact) +
2D Compatibility (PS) -4940 + (NN) -1644 + (LL) 7048
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1149.0 ( 5.50 by residue)
QMean score : 0.438
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