Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVLFLSIFKKSFNDFLSARMLL-INLGPILLSLAFFGA-IFYYNGGS-----IVNYCQTLLPQSLNDYAHSQGFFAGVFAWVFKA-----LVYFLIFWIVILLSLVINIFASIFY----TPLVVSYLHQKYYPHVVLEEFGSILFSIKYFLKSLTFMLLFLAVLTPLY-FIPFIGVFGVFFSIVPHF-LFFKNTMSLDIASMIFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYFFIFKEKEC |
| 3RRW Chain:A ((4-258)) | LNQRRQRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAMTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLFDRNFGRSDATEADPEGRVPQWGKATVQEMKDKFIAVGLGPRQLAV--MSAFLGPDQAATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKLSCLGQQINFEAYTYPV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307107 for 1796 contacts (-171.0/contact) +
2D Compatibility (PS) -23042 + (NN) 2458 + (LL) 568
1D Compatibility (HY) 7200 + (ID) 1700
Total energy: -321623.0 ( -179.08 by residue)
QMean score : 0.241
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