Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGCSFIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQQPVQTHERMTTSSEHVTPLDFNYPVHIVQAPQN-HHVVGILMPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVL----RFQDEKALNVQDKKKIFSVLDLKGWVGILEDLKMNLKDPNSPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAITYTYTSTNNASGGFNSSKSVIHENLDKNREDAIHKILNRMYAVVMKKAVTELTKENIAKYRDAIDRMKGFKSSMPQKK |
1DII Chain:B ((422-484)) | ------------------------------------------------------------------LDYVAEFIVAPRDMHHVIDVLY------DRTNPEETKRADACFNELLDEFEKEGYAVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDLNNDF------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15788 for 263 contacts (-60.0/contact) +
2D Compatibility (PS) -6085 + (NN) -229 + (LL) 10972
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -16730.0 ( -63.61 by residue)
QMean score : 0.391
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