Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKD--SKLKRIAT------------IKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKT-SFINPVESVFASLEYPKSVKVFWSPHPNP-----SVSKYIIQRQNKDGKFLNVGAVK-NRLFVEFFDKDLEDGQKYRYQIIAENFM-----GDKSRPSVIVEGKT-KDLPKEIANVRVSQNLTRQIELSWDKSPE-EDVIAYRIYASNNRND--------KYKF-IA-Q----TTNTSYVDK--IEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANS-KTPLR-FGNITQNQFVDKDMKVGVAYRYQVVSVDKD----GLESHPSKEVRLFLER |
| 2GYS Chain:A ((15-418)) | ---------------------------------------------------------YTSHITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGT---RLTVTLTQHVQPPEPRDLQIS-TDQDHFLLTWSVAL--HWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKP----SAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIK-S-S--VN----IQMAPP-SLQVT---DSYSLRWET-----DHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30841 for 1990 contacts (-15.5/contact) +
2D Compatibility (PS) -35527 + (NN) -3034 + (LL) 4524
1D Compatibility (HY) 4400 + (ID) 1650
Total energy: -62128.0 ( -31.22 by residue)
QMean score : 0.356
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