Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPL-DLRRLEKLH--FDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNIVGSNESPENVYGFSKLCMDEFVLSHSSD---NVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSGVYNVGYSQARSYNEIVSILKEHLGDF-KVSYIKNPYTFFQ----KHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 3RUC Chain:A ((26-343)) | ----------KTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF------STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHI-----KYREFRSGDVRASQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144938 for 2540 contacts (-57.1/contact) +
2D Compatibility (PS) -31441 + (NN) -11883 + (LL) 1264
1D Compatibility (HY) -19200 + (ID) 4300
Total energy: -210498.0 ( -82.87 by residue)
QMean score : 0.467
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