Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKASIYDFTLDELSQLLKPSFRAKQLYLWLYAKYKTSFKDMQNNFSKDFIAYLEQEFTLRTIEIAHVRESVDGSKKYLFKSLRDNHTFEAVLLKMKDKKIDEETNAVLEGEKYTVCVSCQIGCQVGCSFCFTQKGGF--VRDLKASEIIQQALLIKEANNLPIEKALNIVFMGMGE-PLN--NLDEVCKAVEIFNTGMQISPKRITISTSGV-AD-KIPILAGKNLGVQLAISLHAVDDKTRSSLMPLNKKYNIECVLNEVRKWPLEQRKRVMFEYLLIKDLNDSLDCAKKLLKLLNGIKS-KVNLILFNPHEGSKFERPSLESARMFADFLNAKGLLCTIRESKALDIEAACGQLREKKLQQKI |
| 3T7V Chain:A ((62-246)) | -----------------------------------------------------------------------------------------------------------------NCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKG------AGFHMVDLTM-GEDPYYYEDPNRFVELVQIVKEELG---LPIMI-SPGLMDNATLLKAREKG-ANFLALYQETYDTELYRKLRVG---QSFDGRVNARRFAKQ-QGYCVEDG--ILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88811 for 1329 contacts (-66.8/contact) +
2D Compatibility (PS) -18771 + (NN) -8459 + (LL) 10420
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -112021.0 ( -84.29 by residue)
QMean score : 0.433
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