Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAIALAKN--HPDLFIGQHTNFLLGKPCANPAEIPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKWSDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR |
2Y8U Chain:A ((33-151)) | -NTIALTFDD-GPSE-YTPQLLDLLSRYSAR-ATFFVLGDAAAQNPGLLQRMRDEGHQVGAHTYD---HV-------------------------SLP-SLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYL---ETNELVLQVMRDLDYRVIS------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21214 for 862 contacts (-24.6/contact) +
2D Compatibility (PS) -12782 + (NN) -6644 + (LL) 8352
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -34988.0 ( -40.59 by residue)
QMean score : 0.462
|
|
|