Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLVCNAGMSTS-FLVEKMKAAGTEQGVEANIWAVSDAELHENW-----EKADVILLGPQVGY-LKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG
2KYR Chain:A ((8-104))
----LCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFE-----SRDVYEITLQD-AIKNAAGIIKEIEEMIA
General information:
TITO was launched using:
RESULT:
Template:
2KYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45964 for 681 contacts (-67.5/contact) +
2D Compatibility (PS) -9547 + (NN) -1358 + (LL) 592
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -60427.0 ( -88.73 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2KYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYR-query.scw
PDB file :
Tito_Scwrl_2KYR.pdb
: