Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MRIFCGIMSIQAGFIGALAEILSPDSKKNNLF-MIP-EDLAASSGYLMSLAMVLAGILIICAYRNDFLIFMALILW-LFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER
3AJF Chain:A ((2-93))
GLSNIVLTCKDLPIPIDLLSLFFDILNERHPSFDEHMFLQMIRKPDD--------------------PENLSVFLKSAIWMLS-------HKRDLPGHYRLPLTCLVSTYSEYFVELKP----------
General information:
TITO was launched using:
RESULT:
Template:
3AJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88115 for 506 contacts (-174.1/contact) +
2D Compatibility (PS) -8955 + (NN) -2306 + (LL) 3172
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -101704.0 ( -201.00 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3AJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJF-query.scw
PDB file :
Tito_Scwrl_3AJF.pdb
: