Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDAEIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIGAMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAIYDQLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNRAMRLTGMVTSKDILEKNP--SISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKTDTGEEADYEFKVSPQMTNSLGTLSYGVFTQVVCEVVQQKLFSMKKRNVAIENVTMYFLKPVQMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER |
3KPB Chain:A ((2-119)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70444 for 843 contacts (-83.6/contact) +
2D Compatibility (PS) -12470 + (NN) -2108 + (LL) 26840
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -66232.0 ( -78.57 by residue)
QMean score : 0.571
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