Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFRLGR-MGGYVLTRHVGEHPRVLVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKYIQYLKQTIENDF---NGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVGSTHPEALAAFVLDKK---ADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYL--REQG--LLNNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFLDHNT-TGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVSKVIDEVEAE-MAGNGRV---------------LVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND |
| 1K35 Chain:A ((19-456)) | ---------IRGVVGDTLTAETAYWIGRAIGSESLAR--GE-PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIEKND------LASGVGSV----EQVDILPRYFKQ-IRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGG------RPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINIT--VTEDSKFA-IIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEE----LERIKTVFRNQLKAVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137736 for 3604 contacts (-38.2/contact) +
2D Compatibility (PS) -44303 + (NN) -20780 + (LL) 1724
1D Compatibility (HY) -31200 + (ID) 6550
Total energy: -238845.0 ( -66.27 by residue)
QMean score : 0.470
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