Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEIKFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQ-SVRAQARFAKEMKRLEVANIPVFMIHGNHDF--IEKHKEKLALPSNVHVFSEQVEVMLHKTATGVSVNIYGFSYNE------RHIRSSRIDE-----------------YKVQGDADFHIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGN-IQGRNRKESGEKGASIINLSEASTT-IDFIGTSPIIWEEIIIPLPKNSEINAFYREITNVLESYQGRSHSYFLHIIIQMASSQKINTNDWLQMLQEEVELSNTTFVWVHKLTTEITNRSNLQTWYESHLAGEEIRRSFEQLQDESAFYQSVEALYLESGANRYLDDLSEQERERLLENALMELGMTLAEVEGDEK |
| 3QG5 Chain:C ((2-264)) | ----KILHTSDWHL-----GVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKR-MMRTAPVVVLPGNHDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDENEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVE------------REIIIN-----------RALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASPL---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71873 for 1667 contacts (-43.1/contact) +
2D Compatibility (PS) -23637 + (NN) -13067 + (LL) 15844
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -110283.0 ( -66.16 by residue)
QMean score : 0.381
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