Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKEGIFFKIVICFVTIFICLTPLSTSVSAHASVNREDGKEGNTLEQTVSVDKENPDLFVNQSVENNGPKRLFANQTESGGSKYKFVTKQTVSLAAANNIYSLAFLAAGGALGRVAKSTIAAAASSIVGGGASLLKKYNYMRQTIYKYSTKKEDKYKVINEYLYTKNGKPGKITTSYSTVRK |
| 1LF6 Chain:A ((440-497)) | ----------------------------------------------------------------------------------------------------------------IGGYSPATMAAEVAGLTC--AAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 750 for 312 contacts (2.4/contact) +
2D Compatibility (PS) -6060 + (NN) -49 + (LL) 7620
1D Compatibility (HY) -1200 + (ID) 800
Total energy: 261.0 ( 0.84 by residue)
QMean score : 0.369
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