Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKG--------LGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVP----LYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL
2TPS Chain:A ((2-227))
HGIRMTRISREMMKELLSVYFIMGSNNTKAD-----PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVN--DDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETK-----KDTRAVQGVSLIEAVRRQGISIPIVGIGG-------ITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR-------------
General information:
TITO was launched using:
RESULT:
Template:
2TPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -211135 for 1758 contacts (-120.1/contact) +
2D Compatibility (PS) -22555 + (NN) -2980 + (LL) 3212
1D Compatibility (HY) 2000 + (ID) 1400
Total energy: -232858.0 ( -132.46 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_2TPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2TPS-query.scw
PDB file :
Tito_Scwrl_2TPS.pdb
: