Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKHITTVVIWKILRCLSLVFGVSILTFILLKQSPVDPVMASVNYDTSLTPVQYKAIAHHYGLDKPAPVQYFIWLKNFIQGHLGTSLVYRQPVIDIIRSRAGASFILMGLSWVLSGLIGFILGTLSAFHQGKLLDRIVRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGT-LSQDITLADRIKHLILPVFTLSILGIANVTLHTRTKMMSVLSSEYVLFARARGETEWQIFKNHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGSTLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV |
| 4P4M Chain:A ((92-378)) | KPKLKAIQELTQVHGFGPRAAAALFDREGIFT--------VDELLQKADSIPSLTDQQRVGIKYFYDINEKIPMQESVLHENYLREKCMEVL-GKDFSILICGSYRRRHPFSGDVDAILSRTLDAPPLSEPVAATG-VLGHFVEFLESLKYLEATMAQGPL----KYMGMGRLPPRINTKVYKARRVDIRLIE---TKSVPTAMLTFTGSKNFNVIMRQAAIS---KGYLL-------NEYGLFKLGTPEEA-------RGKNAGEELG----------VPKDELEDKRVEVRSEQDVFDVLGM-----------------PYAKPENRDP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194256 for 1948 contacts (-99.7/contact) +
2D Compatibility (PS) -26950 + (NN) -420 + (LL) 6120
1D Compatibility (HY) -4800 + (ID) 2700
Total energy: -223006.0 ( -114.48 by residue)
QMean score : 0.161
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