Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSTNELDIRLRAFINAPDNFLDSIGLVNALHHSTVWASKEPYAIQVDGQEVVPVFTDITDLNHFKEEQESARDMFWESRRSLDVLDEAISHGLSGLVYNLKKEGDFGNSTIFYCEDMVQFMNNYTTILNQLLNEDNIVADIMDKTYLV------PAFVHPREEGSFDRFFPTMSTPEGKSYVPVFSNLLSFEKWYNHNDFGGAFRKAQGVILAWTIDDIYKPRNGENEIDDTFGVAINPFDEQQVLVDWSDVEND |
1Y09 Chain:A ((48-134)) | -----------------------------------------------------------------------------------------LSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVAFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -24917 for 407 contacts (-61.2/contact) +
2D Compatibility (PS) -7633 + (NN) 4687 + (LL) 10056
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -21607.0 ( -53.09 by residue)
QMean score : 0.026
|
|
|