Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
1BAZ Chain:A ((5-50))
----SKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16172 for 208 contacts (-77.8/contact) +
2D Compatibility (PS) -4918 + (NN) -3131 + (LL) 4480
1D Compatibility (HY) -400 + (ID) 250
Total energy: -20391.0 ( -98.03 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1BAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BAZ-query.scw
PDB file :
Tito_Scwrl_1BAZ.pdb
: