Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MFLSIMAGVIAFVLTVIAI-P-RFIKFYQLKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLIVALLVSLIFSIILS--KENSGNLGATFGILSVVL-IYGIIGFLDDFLKIFKQ---------INEGLTPKQKMSLQ-LI---AGLIFYFVHVLPSG--------TSAINIFGFYLEVGYLYAFFVLFWVVGF-SNAVNLTDGIDGLASISVVISLITYGIIAYNQTQFDILLIIVIMIGALLGFFVFNHKPAKVFMGDVGSLALGAMLAAISIALRQEWTLLFIGFVYVFETS---SVMLQ-VAYFKYTKKKTGV-GKRIFRMTPFHHHLELGGVSGKGNKWSE------WKVDAFLWAIGIFMSAITLAILYL |
| 3UP6 Chain:A ((35-358)) | TRAQLSI--DLVNNVEQQEKINSMRFIVFGSTP--GGVRLDVNEHILLSTPETATDIDAQLLEVTSSNDILVVVIANEPQSLTSQLDGIANLLTLQEMIYDISSILNSDGQIISATGMPMTGVIRDISIAPDETKTVQMVIERAVARVDVFIEAIDGGAVTGYTAGSTSVTLHNFSHDS-----YFV-------MGNVGNGTRDNADSSK--------NYGKVKEDVSESN--LLTHSWTAATTETWAYSSAPG---------------------AENRKLLCSFYTAERLFKSDYSDRLSISMANVLKGPSDVTGITGKVIESVTKVD-----GTGSPTAQPFTEIRRNNVYQVTARVGKIGIQILTISVEDW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108782 for 1733 contacts (-62.8/contact) +
2D Compatibility (PS) -27978 + (NN) 15882 + (LL) 6008
1D Compatibility (HY) 15200 + (ID) 1300
Total energy: -100970.0 ( -58.26 by residue)
QMean score : -0.002
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