Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDY---YLSHELAVIHKKPTPVQIVKVDYPK----RSRAKIVEAYFRQASTTDY-SGVYKGYYIDFEAKETRQKTAMPMKNF--HAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFP-QVPYLDIIEE-KLLGGDYN--------------- |
4OBX Chain:A ((23-257)) | SVANRYDLMNDVMSLGIHRLWKDHFINKLDAGKRPNSTTPLNFIDVAGGSGDIAFGLLDHAESKFGDTESTMDIVDINPDMLKEGEKRAMEQGKYFKDPRVRFLVSNGEKLEEID-SDSKDIYTVSFGIRNFTDIQKGLNTAYRVLKPGGI-FYCLEFSKIENPLMDFAYQQWAKVLPVMGSMIAN-DYDSYQYLVESIERFPDQETFKSMIEKAGFKSAGYESLTFGICAIHWGIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3236 for 1380 contacts (2.3/contact) +
2D Compatibility (PS) -20128 + (NN) 1470 + (LL) 392
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -24580.0 ( -17.81 by residue)
QMean score : 0.169
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