Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFL--EAVTCKIYVDPKEF-EHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
| 2YWE Chain:A ((404-484)) | ---------------------------------------------------------------------------------------------------------------------------------EEPFVLVTIITPKEYVGPIIQLCQEKRGIQKNMTYLDPNTVYLEYEMPLSEIIVDFHDKIKSISRGFASYDYEFIGYRPSDLIKLTVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34723 for 528 contacts (-65.8/contact) +
2D Compatibility (PS) -8158 + (NN) 1070 + (LL) 8004
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -37007.0 ( -70.09 by residue)
QMean score : 0.443
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