Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEQIKLSKSDRQKVWWRSQF--LQGSWNYERMQNMGWAYALIPALKKLYTTKEDRAAALE----RHMEFFNTHPYVAAPIIGVTL--ALEEEKASGTPVEDKAIQGVKIG-------MMGPLAGIGDPVFWFTVRPILGALGASLASAGNIL--GPIIFFVGWNLIRMSFLWYTQELGYKSGKEITKDMSGGILQDITKGASILGMFILAVLVKRWVAINFTVDLPKKTLSEGAYINFPKDHVSGQQLHDILGQVQSGLSLDKMQPQTLQGQLDSLIPGLAGLLLTFFCMWLLKKKVSPITIIIGLFIVGILARLAGVM |
| 1TMO Chain:A ((208-363)) | ------LEHSDTIVLWSNDPYKNLQVGWNAETHE----SFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLGCEQLYVNPQTDVTLMLAIAHEMISKKLYDDKFIQGYSLGFEEFVPYVMGTKDGVAKTPEW--AAPICGVEAHVIRDLAKTLVKGRTQFMMGWCIQRQQHGEQPYWMAAVLATMIGQIGLPGGGISYGHHYSSIGVPSSGAAAPGAFPRNLDENQKPLFDSSDFKGASSTIPVARWIDAILEPGKTIDANGSKVVYPDIKMMIFSGNNPWNHHQDRNRMKQAFHKLECVVTVDVNWTATCRFSDIVLPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35901 for 831 contacts (-43.2/contact) +
2D Compatibility (PS) -14683 + (NN) -5211 + (LL) 1048
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -64697.0 ( -77.85 by residue)
QMean score : 0.160
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