Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MKVKLFAIHLFFIVISFGIKYYHLQGPNLIWNMTLALIALDFAY------------LTSLFKKKILIG------------LFALAWFFFYPNTFYMLTDIIHMHFVGDVLYNKTNLILYILYVSSILFGFLSGIESFSVIMRKFRISNI---FLRWGI----IGIVSFVSSFGIHIGRYARLNSWDILTKPQVVINELLAV------------PSRDSFHFILGFTFLQVLCLIFMDYSAGKKLEK--- |
| 4TWK Chain:A ((14-282)) | TINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVI--TTIGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPGWSALDAIYFVVITLTTIGFGDYVAGGSDIKPVVWFWILVGLAYFAAVLSMIGDWLRVISAENLYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88276 for 1054 contacts (-83.8/contact) +
2D Compatibility (PS) -20193 + (NN) -4081 + (LL) 384
1D Compatibility (HY) -13600 + (ID) 1750
Total energy: -127516.0 ( -120.98 by residue)
QMean score : 0.060
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