Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLFNKRRSLFLTQNSKYLRYVF---NDHFVLVLMFLSGFLLYQYSQ--LLKDFPKTHWPIIVIVSIIIL-MLLAMGGIASYLEPADKQFLLIKEEA----------------IKEIINSAKKRTYIFWLVIQTL----FLVLISPILIKLG-LSVFMITLLIFG------LGIIKWLVITYKVKVFY-NNQNLNWDAAINHEQERKQSILKF-FSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIR-LVTLNILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSY--AVTVIDSI----LIRELKPV----ILLIVLMLIVTEY--------YIPYKIKV-SGKSF------ |
| 4I6M Chain:B ((3-439)) | ---PFRQDSILIIYPRSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVGKQRF--QGCNNLIKNISNRVGLTLDNIDDINKAKAVWEN-IIIVGGTTSISGFKEALLGQLLKDHLIIEP-----EEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNMKGPAALWDVQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318933 for 2390 contacts (-133.4/contact) +
2D Compatibility (PS) -34575 + (NN) 3274 + (LL) 1164
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -356320.0 ( -149.09 by residue)
QMean score : 0.151
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