Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKYVIFSFEEGDYL--CDNKDKLL-IFESRGLAYQYMQKH------------------YLKPIP-LQKTKR-IMY-PMSYYQAPFKVQQVC----
2Z0R Chain:A ((5-101))
LSGTWYVLEGDPGEHLVVEALGERLSGIWTSRELAEAFLAHHPHLGMRVSALESRALKEAYLRALGMLQVEAVMVDYRPGTHRAQVARVKDLLEEVR
General information:
TITO was launched using:
RESULT:
Template:
2Z0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29576 for 372 contacts (-79.5/contact) +
2D Compatibility (PS) -7072 + (NN) -286 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -41334.0 ( -111.11 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_2Z0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z0R-query.scw
PDB file :
Tito_Scwrl_2Z0R.pdb
: