Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKKQLLVLSCVSAIALAGTTTFAEDVIPVDPAVPSTEVVTPPNSVDPSLPTDTTDPSTPVVPEKLPDTSKPAEPETPKEELPAPVDPTTPSAGKEDKQETVPGQAETPKEEVKPENPKSSEDKKKEELVPDNVSKDIIDKVDTTTGEVVFKPIPVTPDKTVIGTKDSQVIIRDQAGRTQVVTPESLGGHVNPNGTVTLKDATGAEKTLPKTGDKQSVLGYLGMMLISVLGYAVKKKVSH |
2RGX Chain:A ((44-86)) | ------------------------------------------------------------------------------------------------------------------PLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6940 for 191 contacts (36.3/contact) +
2D Compatibility (PS) -4551 + (NN) -3157 + (LL) 4616
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -502.0 ( -2.63 by residue)
QMean score : 0.512
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