Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRREVIVFLENQGAIVQGYVSSQTEILLAGHKQLDLFEPDKRSRKYEAALSRIATGQAITILSEEAFFNLVKTSQI
2NTE Chain:A ((14-74))
-QQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQ------STLKCMLGILN-----GCWILKFEWVKACLRRKVC
General information:
TITO was launched using:
RESULT:
Template:
2NTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29731 for 350 contacts (-84.9/contact) +
2D Compatibility (PS) -6562 + (NN) -2997 + (LL) 816
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -41174.0 ( -117.64 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2NTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NTE-query.scw
PDB file :
Tito_Scwrl_2NTE.pdb
: