Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESET---TDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANH--LTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG
4BJM Chain:A ((18-111))--------------------------------------KMKFLKPDQVQKLSTDDLITYMAEKDKNVRDLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESLTRDALLELTEEQYVEKAALFDKDVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNAKIERLALTLLDYLAIAADFLKN


General information:
TITO was launched using:
RESULT:

Template: 4BJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24884 for 499 contacts (49.9/contact) +
2D Compatibility (PS) -9332 + (NN) -559 + (LL) 3528
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 14721.0 ( 29.50 by residue)
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_4BJM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BJM-query.scw
PDB file : Tito_Scwrl_4BJM.pdb: