Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESET---TDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANH--LTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
4BJM Chain:A ((18-111)) | --------------------------------------KMKFLKPDQVQKLSTDDLITYMAEKDKNVRDLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESLTRDALLELTEEQYVEKAALFDKDVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNAKIERLALTLLDYLAIAADFLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24884 for 499 contacts (49.9/contact) +
2D Compatibility (PS) -9332 + (NN) -559 + (LL) 3528
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 14721.0 ( 29.50 by residue)
QMean score : 0.245
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