Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIQTTNLDKGGGGKSSHTYNEGDWLSRVMGKRVLLIDGARECNLTHSFDVTS--------DKTIYDIFIT---GEYEICRINDKLSLIRGDERLTDEQLDLASRNNKYLQLFMWFSEHYEELAEQFDIILIDTHNDESLVTANCIAVSDIVLGVTDASTNGFRAWLALKKFVDDIKNEAIEVITKKSYVKAEAYLIGNKIEYYGNNVTETCKQFLDVVQEDEAYLGSIQKKELMAKSLVINQSVFEQREHMTEKQKQDHQKFYDNIEYVYQNILTVLEGETK |
3K9G Chain:A ((27-267)) | PKIITIASIKGGVGKSTSAIILATLLSK--NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINVDNNLDLIPSYLTLHNFSEDKIE------HKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVESLDLFNFFVRKLNLF------------LPIFLIITRFK----KN-RTHKTLFEILKTKDRFLGTISE-----------------NK-----------DYIKEYENILEIFLKKI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68133 for 1732 contacts (-39.3/contact) +
2D Compatibility (PS) -21873 + (NN) 744 + (LL) 4884
1D Compatibility (HY) -17600 + (ID) 2400
Total energy: -104378.0 ( -60.26 by residue)
QMean score : 0.407
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