Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLIAIDMDGTLLNDEKKIPKENIQAIKEATQAGIKIVLCTGRPMSGILPYFNELGLTKEEYIIMNNGCSTYSTKDWQLIDSATLTHDELIFLEEVVKEFPNVCLTLTAENTFYAVGEE-------VPEIVAYDADLVFTKAKST-SLDALRNQEEIVFQAMYMGLDADVTAFQEAVEEALISKFSGV---RSQDYIYEIMPQGVTKARGLKSLIAKLGLDINQVMAIGDAPNDIELLDLVPNSVAMGNASDEIKSRCKYITVDNNKAGVAKAIYDYALR
3DNP Chain:A ((7-273))--QLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAK--LITHSGAYIAEKIDAPFFEK-RISDDHTFNIVQVLESY-QCNIRLLHEK--YSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDI---QHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRM


General information:
TITO was launched using:
RESULT:

Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153556 for 2196 contacts (-69.9/contact) +
2D Compatibility (PS) -28126 + (NN) -12310 + (LL) 1124
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -213168.0 ( -97.07 by residue)
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_3DNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DNP-query.scw
PDB file : Tito_Scwrl_3DNP.pdb: