Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESLKTIVKTNSDKKLFDGDLQVSYGEFYNLVRQDMASQDNRKHVISTHSLLNQLVRFVSKLCQKALPIICKPNLTHNEISRLEKEVQYAPQLADFGVLSSGTTA---DAKLLWRSFASWSDFFSIQNAYFSVTSNSRLFIQGDFSFTGNLNLVLSLLLLGGTLVVTQKNSVKYWQTLWEKTGVTHLYLLPSYLKLVEQYSKETA----LDNKTIIT-SSQYVSDSLLEGLYIKHPKVSVKIFYGASELNYVSWYDGRDIRDKPQYVGEIVPNVAVRIKEGRIFVKTPYSICGLSSEYCAGDYGELI-------------------------------------DGKLYLFGRGDDWCNQSGIKLYLPRLIEKI-KTCPYIKDAVAFTKESQSHGQESHCCIV------LIENQMQQECLKWLSEHFEKKYGFKHYHIVSKIPLMPSGKIDYQQLKRQLA |
| 3CW8 Chain:X ((146-502)) | -------------------------------------------------------------------------------------EDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVIEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAMN--SLY-----MRQPKTGTEMAPGFFSEVRIVRIG-------GGVDEIVANGEEGELIVAASDSAFVGYLNQPEATAEKLQDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIH-PSEIERVLGTAPGVTEVVVIGLADQ-WGQSVTACVVPRLGETLSADALDTFCRSSELADFKRP---KRYFILDQLPKNALNKVLRRQLVQQV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118977 for 2284 contacts (-52.1/contact) +
2D Compatibility (PS) -32465 + (NN) -8967 + (LL) 7284
1D Compatibility (HY) -9200 + (ID) 3950
Total energy: -166275.0 ( -72.80 by residue)
QMean score : 0.385
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