Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFPNIDNIIKNYIKEMITHSDIPDLQKQLETAYQVPYSFALGIYISTIESIILNWIDHDFTEEPEEIARYITSVVRI
2QIB Chain:A ((146-186))
----------------------------------PARLELVVRSWISLAESTALLWLDG-RRIPRAELETQLVHDFAA
General information:
TITO was launched using:
RESULT:
Template:
2QIB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19334 for 192 contacts (-100.7/contact) +
2D Compatibility (PS) -4026 + (NN) 1387 + (LL) 2520
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -21053.0 ( -109.65 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2QIB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIB-query.scw
PDB file :
Tito_Scwrl_2QIB.pdb
: