Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLKIKEEI-----ENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND |
2P3T Chain:B ((15-112)) | ----------------------------------------------------------------------------------------QALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQE--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2P3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 51975 for 577 contacts (90.1/contact) +
2D Compatibility (PS) -9276 + (NN) 1726 + (LL) 7464
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: 48389.0 ( 83.86 by residue)
QMean score : 0.030
|
|
|