Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFNRKKLKFLGISLATLTATTVTLVACGNESKNSGDNKVINWYIPTEISTLDISKNTDAYSNLAIGNSGSNLLRIDKEGKPKPDLAKKVSVSSDGLTYTATLRDNLKWSDGSKLSAEDFVYTWRRIVDPKTASEYAYLATESHLLNADKINSGDIKDLNKLGVTAKGNQVTFKLT--SPCPQFKYYLAFSNFMPQKQSYVEKVGKDYGTTSKNQIYSGPYLVKDWNGSNGKFKLVKNKYYWDSKHVKTNSVIVQTIKKPDTAVQMYKQGQIDFA--------------EISGTSAI-------YNQTGSVKALTNQ-KIRQALNLATDRKGVVKAAVDTGSTPAESLVPKKLAKLPNGEDLSKYTAP-GYTYNTSKAQKLFKEGLAEVGQSSLKLTITAD---SDSPAAKNAVDYVKSTWESALPGLTVEEKFVTFKQRLEDAKNENFDVVLFSWGGDYPEGSTFYGLFTTNSAYNYGKFSSKEYDNAYQKAITTDALKPGDAAND---YKTAEKALFDQSYYNPVYYLGKKGLQNSKLKGLVRNSTGLNVDFTYAYKTE |
| 1B2H Chain:A ((21-484)) | -----------------------------------------------SEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWE-NKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGK-KPATDLGVKALDDH-TFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFG-DKWTQPANIVTNGAYKLKNW-VVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPY-------TDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADK-PLTFDLLYNTSDLHKKLAIAVASIWKKNL-GVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDK-----LIADTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6929 for 3518 contacts (-2.0/contact) +
2D Compatibility (PS) -46536 + (NN) -17604 + (LL) 4128
1D Compatibility (HY) -15600 + (ID) 7400
Total energy: -89941.0 ( -25.57 by residue)
QMean score : 0.440
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