Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYLDNAATTALTPSVIEKMTNVMTSNYGNP-SSIHTFGRQANQLLRECRQIIAEYLNVNS-REIIFTSGGTESNNTAIKGYALANQLKGKHIITSEIEHHSVLHTMTYLSERFGFDITYLKPN-HGQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLRNHQAVFHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYCAPHHFDSL--LHGG----------------DQEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQ----LRTTFLDAISDLDFYLNNGQDCLPHVLNIGFPRQNNGLLLTQLDLAGFAVSTGSACTAGTVEPSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD |
| 1JF9 Chain:A ((26-403)) | LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLY---GPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHC-------AMPLMAYY--NVPAM---CRASLAMYNTHEEVDRLVTGLQRIHRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228291 for 3102 contacts (-73.6/contact) +
2D Compatibility (PS) -37405 + (NN) -8582 + (LL) 216
1D Compatibility (HY) -21600 + (ID) 5000
Total energy: -300662.0 ( -96.93 by residue)
QMean score : 0.504
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