Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLYVQLM-----------VILTFS--FAGEVLSTIFNLPVPGSIIGLILLFLA--LKYKIIRLRHIDAVGNFLLANMTILFLPPAVGLME------HFQDIKPY----LFGIAIIILGALFLNILTIGLVS--------------QWIKKRYEGDYPEIGGKNGNFNE-----------
1EEX Chain:B ((46-223))
--GFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGIPHKSILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVA
General information:
TITO was launched using:
RESULT:
Template:
1EEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154605 for 959 contacts (-161.2/contact) +
2D Compatibility (PS) -12406 + (NN) 7195 + (LL) 272
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -163794.0 ( -170.80 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1EEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EEX-query.scw
PDB file :
Tito_Scwrl_1EEX.pdb
: