Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRALKEDFFLTLTSLKNQFWVYIGTGILIQTLVAYLVKGILSFIFRRILILSNTPAVTKDNWTLLFNHPLALLLFILYIVILIGFIYTEFAIYTIAILKTEFSLSIKKWLTIFPKKIKSLLGPQLIWVSIYLLLTIPLANLGLRSSILEHLKIPDFISGELTKTVFGKIGYSTLLLLICYLNLRLIYFLPLTILTDYNAKEALLESWKLSRGKHQWRLLSKIILTSLFISVIGTVALAVVAGTSSFIDHSGNNFPLQATFYNLLKSILFAVTLLIKCLIISHLLADIKQNKSIVQQWRAWKGVQHKQKFKHIACVILALAIGTTALKNAIALALLQDNISIKKELIAHRGDTSHGVENSIEALKAAHKAKADYSEMDVIMTKDHKLVVIHDDNLKR----------LSGMNKDVSKLTLDQVTKIP--------IHQGRFAS-------HIPSFAEFMK-TAQSLDQK--IMIELK--PY----NQNLDIYADEFIKEFKELRLSTKHKVMSLNLTLIEKVEKKLPQLDTGYLIPLHWGTLQNHNVDFYGIEEF--SYND----------------WIAY--------LAQEYNKQLYV--WTINRDNLMIRYLQSPVNGIITDELNLFKVINKDIKNSPNYYQRALQLIDSEG |
| 3L12 Chain:A ((20-296)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDGQGHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQL------PE----------GPDYDRMTESLPQAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPEDIRRMATTGVDGIVTDYPGRTQRILIDMGLSWT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79841 for 1452 contacts (-55.0/contact) +
2D Compatibility (PS) -22334 + (NN) -9807 + (LL) 34976
1D Compatibility (HY) -16800 + (ID) 2900
Total energy: -96706.0 ( -66.60 by residue)
QMean score : 0.434
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