Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITSIYGQSPRSIAL-ISQKLVKDVGRQLGYDEMGIYFYNDHAET-----------HGER---S------TRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-GARIITFVHDIVPLMFESNFYLLDRVIDMYNRSDVVILPTKAMHDYLIEKGMTTSKVLYQEVWDHPVNIDLP-----R--PECQKVLSFAGDIQRFPF----VNDWK------ENIPLIYYGDGSRL----------------NSEANVHAQGW-------KDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVE--------------------TLEEAVEKINNME-KETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 3OY2 Chain:A ((1-388)) | MKLIIVGAHS--SVPSGYGRVMRAIVPRISK-AHEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFI-DVHKPDIVMIYNDPIV---IGNYLLAMGKCSHRTKIVLYVDLVSKNIREN-----LWWIFSHPKVVGVMAMSKCWISDICNYGCK-VPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYN-ACDVIVNC-----------SSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGD-CVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFV----KTKPTWDDISSDIIDFFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168763 for 2339 contacts (-72.2/contact) +
2D Compatibility (PS) -32428 + (NN) -13822 + (LL) 2464
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -221899.0 ( -94.87 by residue)
QMean score : 0.401
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