Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGISDSVHGLHG--IWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILGVIVAVLFLTNLD----LNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
| 4F0D Chain:A ((2-271)) | MGWAAAREAAGRDMLAADLRCSLFASALQSYK------RDSVLRPFPASYA---------------------RGDCKDFEALLADASKLP-NLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAP---DFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHN---------GLHCHKT-----SLFGEG-----TYLTSDLSLALIYSP---------HGHGWQHSLLGPILSCVAVCEVIDHPDKYFVVTNNQLLRVKYLLVYSQ---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -237683 for 1693 contacts (-140.4/contact) +
2D Compatibility (PS) -23411 + (NN) -4641 + (LL) 6640
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -265845.0 ( -157.03 by residue)
QMean score : 0.162
|
|
|