Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREKGMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPSNNEEALALTMPSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNGGRIGVITVVEGGDDALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
| 4PC6 Chain:C ((3-277)) | ---ITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA-------QFEEERVALVAKIGENINIRRVAALEG---DVLGSYQH-GARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEY---------------------------------------QVQLDIAMQ---SGKPKEIAEKMVEGRMKKFT-------GEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMS------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -90827 for 2112 contacts (-43.0/contact) +
2D Compatibility (PS) -30544 + (NN) -17941 + (LL) 5112
1D Compatibility (HY) -16800 + (ID) 6400
Total energy: -157400.0 ( -74.53 by residue)
QMean score : 0.553
|
|
|