Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVLKPGLLTTVQDIGRTGYQKYGVLASGAMDTVSLRIANLLIGNGENEAGLEITMMGPGPSFHFSKQTLIAVTGADFTLRINDEEAPLWKPVLIKENSTVSFGPCKLGSRAYLAAAGGIEVPAVMESKSTYVRGSIGGLHGRALQKEDELNIGEMSALSQTILSRLSSQLGKQGFAAPKWSVSRGRFLPLKKNPVIRVLEGKQFAFFTEESKTRFYEEAFRVTPQSDRMGYRLKGE---PLELKAPLEMVSEAVSFGTVQVPPDGNPIILLADRQTTGGYPRIAHIISADLPIVS-----QIMPGEHVQFEPVSLQEAEALAVEREQHIKELKTRMKMEWLT
2PHC Chain:B ((112-217))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATP-RLEKPRLKVPAGSVGIAGK-QTGWYAIES--PGGWRIIGRI-PLRTFNPGKVPPSIVLPGDYVKFVPIDEKEFW-----------------------


General information:
TITO was launched using:
RESULT:

Template: 2PHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 410 -41432 -101.05 -422.78
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain B : 0.54

3D Compatibility (PKB) : -101.05
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_2PHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PHC-query.scw
PDB file : Tito_Scwrl_2PHC.pdb: