Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIAFLNSLVV---TSPGFYKAEKITLDEV--KQWLKHYDGRYKSFIGHKSTAQFLQKLLGIRIE--------QNRKTFRHMKYQKAICFSLY-----ERYPEN-VLLTQRDLEKARYQFYLLTRLD
1SSF Chain:A ((7-129))--NSFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLG-KDILLCDPIPLDTEVTALSEDEYFSAGVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQ-YGLGPYE


General information:
TITO was launched using:
RESULT:

Template: 1SSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 506 -36149 -71.44 -347.59
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -71.44
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_1SSF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SSF-query.scw
PDB file : Tito_Scwrl_1SSF.pdb: