Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKKVVLPLVFSAPFIFFFVLCIVVVMTISRENQVGDDFIGGGDGEYETVGIAPEVERFRAVFEKYARQEGVFDQVNIIMALTMQESGGRSLDIMQSSESIGLPPNSITDPERSIEVGIKHFKKVFKQAGGDVRLTLQAYNFGSGFIDYVKKNGGKYTKKLALDFSRLQAFKMGWKSYGDPSYVDHVMRYVKGSDKNVKPVKGSMDFYETVMKEALKYEGQPYAW--GGSNPET----------GFDCSGLVQWSFAKAGITLPRTAQEQHGATKKISEKEATAGDLVFFGGTYEGKAITHVGIYVGNGRMFNSNDSGIQYSDLKSGYWRDHLVSFGRIK
3GT2 Chain:A ((17-129))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVVIARGLSQRGVPFSWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQARKGDLIFYG----PEGTQSVAMYLGNNQMLEVGDV-VQVSPVRT--------------


General information:
TITO was launched using:
RESULT:

Template: 3GT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 451 -47401 -105.10 -469.32
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -105.10
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_3GT2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GT2-query.scw
PDB file : Tito_Scwrl_3GT2.pdb: