Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTHIAWASACLLLVMLTGFFTIGQQTYKIEKLKDKNEVLSEKIKELNHIESTSSASENKAFFEAFFNYSDIDIRYETVKKHTTGKGFDYAFPSRSD-QKHTVSVQSELLSL---ESYSKPLDE--SHELFLNIVEVAT---TA--------NSV-TTNQVLIVQTTMKKE--KDGWLVDNVQVKGNG
3QK9 Chain:A ((101-219))---------------------------------------------------------------------------VKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPE--GWKILEFVRGGSR


General information:
TITO was launched using:
RESULT:

Template: 3QK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 272 -25801 -94.85 -283.52
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -94.85
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_3QK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QK9-query.scw
PDB file : Tito_Scwrl_3QK9.pdb: