Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQRVSYYEIAPEGMKIMMDMEKY-TK-QSSINRTTRELIKIRVSQMNGCAFCIDMHTSDARKMGETEQRIYCLHAWNECDFYSPEEKAALELSEHITLIPSKRVPDELYHRVREH-YDEEQYVDLVLIINQINSWNRISIAMGNRAASK
2PRR Chain:A ((40-185))--NVFLTLAHRPDEFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCLYCVVAHGAILRIYEKKPLVADQVAVNYLKADIPPRQRAMLDFALKVCKAS-HEVNEADFEALREHGFTDEDAWDIAAITAFFGLSNRMANTIGMRPND-


General information:
TITO was launched using:
RESULT:

Template: 2PRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 615 -71411 -116.11 -499.37
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -116.11
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_2PRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PRR-query.scw
PDB file : Tito_Scwrl_2PRR.pdb: