Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIKPSPD-------NIQELYLDSLRALGIDPLEH--DIRFVEDN--WENPSLGCAGLGWEVWLD------GMEITQFTYFQQ----VGGLE----CKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
4H2W Chain:A ((164-312))------------------------------------------LPKGGLRFDVAADCFRREP-SKH--LDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDPFFGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDANGEPAHTGCVAFGMDRLAVAMF------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4H2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 366 -17207 -47.01 -138.77
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -47.01
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_4H2W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H2W-query.scw
PDB file : Tito_Scwrl_4H2W.pdb: