Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPL-ELNSYIGIGSAWDLD-RYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYVLILSGDHIYKMDYGKMLDYHIEKKADVTISVIEVGWEEASRFGIMKANPDGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEM-DDQNPYSSHDFGKDIIPLLLEEKKKLSAYPF-KGY-WKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEGCVVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGMVLPDGAVIRSEKDIEEVLLVSEEFVEKELI
4B2X Chain:A ((11-246))MKRKGI--ILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQY-----AVQPSPDGLAQAFLIGE-SFIGNDLS---------ALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV--LDPERYGVVEFDQGGKAISLEEKPLEPKSNYAVTGLYFYD----QQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAG-----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4B2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1237 -24923 -20.15 -107.89
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -20.15
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_4B2X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B2X-query.scw
PDB file : Tito_Scwrl_4B2X.pdb: