Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKKTV-RPL-VKHIAFLYWLTDKEELEDVYFKTMRLEVEK----------LAKAFN--------VDMTTYKIADGIESIPEHTEGFIAVGTFSDEELAFLRNLTE-NGVFID-STPDPDHFDSVRPDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYMREKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAVGCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAVQLLLEQVQDKRRTVKTLYVGAELIVRKSMN 2PUA Chain:A ((1-330)) -ATIKDVAKRANVSTTTVSHVIN--KTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEA--AYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGL---------LVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLE-ANTGAG----RLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQ--PHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSV-

General information: TITO was launched using: RESULT: Template: 2PUA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1597 -258 -0.16 -0.84 target 2D structure prediction score : 0.69 Monomeric hydrophicity matching model chain A : 0.78 3D Compatibility (PKB) : -0.16 2D Compatibility (Sec. Struct. Predict.) : 0.69 1D Compatibility (Hydrophobicity) : 0.78 QMean score : 0.473

(partial model without unconserved sides chains): PDB file : Tito_2PUA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2PUA-query.scw PDB file : Tito_Scwrl_2PUA.pdb: